This directory contains reciprocal-best netted chains for ponAbe3-mm10. - ponAbe3.mm10.rbest.net.gz: ponAbe3-referenced recip.best net to mm10. - ponAbe3.mm10.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from ponAbe3 to mm10 through the recip.best net. - mm10.ponAbe3.rbest.net.gz: mm10-referenced recip.best net. - mm10.ponAbe3.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/ponAbe3.mm10.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - ponAbe3.mm10.rbest.net.gz 2018-03-26 22:04 140M mm10.ponAbe3.rbest.net.gz 2018-03-26 21:59 91M ponAbe3.mm10.rbest.chain.gz 2018-03-26 22:02 65M mm10.ponAbe3.rbest.chain.gz 2018-03-26 22:00 65M md5sum.txt 2018-03-26 22:04 244 axtRBestNet/ 2018-11-01 11:44 -