This directory contains reciprocal-best netted chains for mm10-danRer10.

 - mm10.danRer10.rbest.net.gz: mm10-referenced recip.best net to danRer10.
 - mm10.danRer10.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from mm10 to danRer10 through the recip.best net.

 - danRer10.mm10.rbest.net.gz: danRer10-referenced recip.best net.
 - danRer10.mm10.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/*.mm10.danRer10.net.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                         Last modified      Size  Description
      Parent Directory                                  -   
      mm10.danRer10.rbest.net.gz   2015-09-18 11:34  8.3M  
      mm10.danRer10.rbest.chain.gz 2015-09-18 11:34  5.0M  
      md5sum.txt                   2015-09-18 11:34  248   
      danRer10.mm10.rbest.net.gz   2015-09-18 11:34  8.5M  
      danRer10.mm10.rbest.chain.gz 2015-09-18 11:34  5.0M  
      axtRBestNet/                 2015-09-18 11:41    -